WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F43D2.4a Sequence Name  F43D2.4a
Length (nt)  657   Chromosome Location  V: 14621159-14621354
Chromosome . Primary Identifier  V Chromosome Location . Start  14621159
Chromosome Location . End  14621354
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F43D2.4a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE30076 HOT-1, isoform a 24.7 218 Caenorhabditis elegans
 

Other

1 RNAi

WormBase ID
WBRNAi00047186

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F43D2.4a 14621159 14621354 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001986 hot-1 F43D2.4 Caenorhabditis elegans

5 Locations


Feature . Primary Identifier
Start End Strand
CDS:F43D2.4a 14621159 14621354 1
CDS:F43D2.4a 14627808 14627900 1
CDS:F43D2.4a 14627946 14628041 1
CDS:F43D2.4a 14628088 14628205 1
CDS:F43D2.4a 14628938 14629091 1

1 Sequence

Length
657

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F43D2.4a.1 F43D2.4a.1 1062   V: 14621135-14629472