WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Nc Primary Transcript :

WormMine ID  Transcript:C54G10.2b Sequence Name  C54G10.2b
Length (nt)  2527   Chromosome Location  V: 14642804-14645745
Chromosome . Primary Identifier  V Chromosome Location . Start  14642804
Chromosome Location . End  14645745 Method  non_coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C54G10.2b

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004337 rfc-1 C54G10.2 Caenorhabditis elegans
 

Other

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C54G10.2b 14642804 14645745 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon207779   517   V: 14642804-14643320 Caenorhabditis elegans
Exon207782   398   V: 14643374-14643771 Caenorhabditis elegans
Exon207785   309   V: 14643887-14644195 Caenorhabditis elegans
Exon207788   320   V: 14644249-14644568 Caenorhabditis elegans
Exon207791   776   V: 14644618-14645393 Caenorhabditis elegans
Exon207794   105   V: 14645437-14645541 Caenorhabditis elegans
Exon207797   68   V: 14645588-14645655 Caenorhabditis elegans
Exon207798   34   V: 14645712-14645745 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C54G10.2b 14642804 14645745 -1

1 Sequence

Length
2527

1 Sequence Ontology Term

Identifier Name Description
transcript