WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C47E8.3.1 Sequence Name  C47E8.3.1
Length (nt)  1334   Chromosome Location  V: 14680314-14683746
Chromosome . Primary Identifier  V Chromosome Location . Start  14680314
Chromosome Location . End  14683746 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C47E8.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008142 C47E8.3 C47E8.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C47E8.3 C47E8.3 1218   V: 14680321-14680371

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C47E8.3.1 14680314 14683746 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon207887   58   V: 14680314-14680371 Caenorhabditis elegans
Exon207888   122   V: 14680419-14680540 Caenorhabditis elegans
Exon207889   85   V: 14681414-14681498 Caenorhabditis elegans
Exon207890   296   V: 14682522-14682817 Caenorhabditis elegans
Exon207891   292   V: 14682873-14683164 Caenorhabditis elegans
Exon207892   110   V: 14683216-14683325 Caenorhabditis elegans
Exon207893   371   V: 14683376-14683746 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C47E8.3.1 14680314 14683746 1

1 Sequence

Length
1334

1 Sequence Ontology Term

Identifier Name Description
transcript