WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R08A2.2.1 Sequence Name  R08A2.2.1
Length (nt)  1184   Chromosome Location  V: 14714207-14715708
Chromosome . Primary Identifier  V Chromosome Location . Start  14714207
Chromosome Location . End  14715708 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R08A2.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011133 R08A2.2 R08A2.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R08A2.2 R08A2.2 1116   V: 14714246-14714349

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:R08A2.2.1 14714207 14715708 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon208011   143   V: 14714207-14714349 Caenorhabditis elegans
Exon208012   139   V: 14714391-14714529 Caenorhabditis elegans
Exon208013   186   V: 14714575-14714760 Caenorhabditis elegans
Exon208014   210   V: 14714806-14715015 Caenorhabditis elegans
Exon208015   336   V: 14715072-14715407 Caenorhabditis elegans
Exon208016   170   V: 14715539-14715708 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:R08A2.2.1 14714207 14715708 -1

1 Sequence

Length
1184

1 Sequence Ontology Term

Identifier Name Description
transcript