WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y50E8A.4a.1 Sequence Name  Y50E8A.4a.1
Length (nt)  2010   Chromosome Location  V: 14731064-14734237
Chromosome . Primary Identifier  V Chromosome Location . Start  14731064
Chromosome Location . End  14734237 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y50E8A.4a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006795 unc-61 Y50E8A.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y50E8A.4a Y50E8A.4a 1593   V: 14731476-14731718

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y50E8A.4a.1 14731064 14734237 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon208034   655   V: 14731064-14731718 Caenorhabditis elegans
Exon208037   490   V: 14731775-14732264 Caenorhabditis elegans
Exon208040   141   V: 14732584-14732724 Caenorhabditis elegans
Exon208043   82   V: 14733076-14733157 Caenorhabditis elegans
Exon208046   140   V: 14733208-14733347 Caenorhabditis elegans
Exon208049   95   V: 14733396-14733490 Caenorhabditis elegans
Exon208052   168   V: 14733606-14733773 Caenorhabditis elegans
Exon208055   54   V: 14733824-14733877 Caenorhabditis elegans
Exon208058   185   V: 14734053-14734237 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y50E8A.4a.1 14731064 14734237 -1

1 Sequence

Length
2010

1 Sequence Ontology Term

Identifier Name Description
transcript