WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y50E8A.4c.1 Sequence Name  Y50E8A.4c.1
Length (nt)  1814   Chromosome Location  V: 14731095-14733879
Chromosome . Primary Identifier  V Chromosome Location . Start  14731095
Chromosome Location . End  14733879 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y50E8A.4c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006795 unc-61 Y50E8A.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y50E8A.4c Y50E8A.4c 1398   V: 14731476-14731730

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y50E8A.4c.1 14731095 14733879 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon208036   636   V: 14731095-14731730 Caenorhabditis elegans
Exon208039   490   V: 14731775-14732264 Caenorhabditis elegans
Exon208042   141   V: 14732584-14732724 Caenorhabditis elegans
Exon208045   82   V: 14733076-14733157 Caenorhabditis elegans
Exon208048   140   V: 14733208-14733347 Caenorhabditis elegans
Exon208051   95   V: 14733396-14733490 Caenorhabditis elegans
Exon208054   174   V: 14733606-14733779 Caenorhabditis elegans
Exon208057   56   V: 14733824-14733879 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y50E8A.4c.1 14731095 14733879 -1

1 Sequence

Length
1814

1 Sequence Ontology Term

Identifier Name Description
transcript