WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y50E8A.6.1 Sequence Name  Y50E8A.6.1
Length (nt)  2189   Chromosome Location  V: 14738503-14741333
Chromosome . Primary Identifier  V Chromosome Location . Start  14738503
Chromosome Location . End  14741333 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y50E8A.6.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013049 Y50E8A.6 Y50E8A.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y50E8A.6 Y50E8A.6 1830   V: 14738900-14738905

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y50E8A.6.1 14738503 14741333 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon208064   169   V: 14738503-14738671 Caenorhabditis elegans
Exon208065   189   V: 14738717-14738905 Caenorhabditis elegans
Exon208066   588   V: 14739141-14739728 Caenorhabditis elegans
Exon208067   531   V: 14739985-14740515 Caenorhabditis elegans
Exon208068   229   V: 14740564-14740792 Caenorhabditis elegans
Exon208069   483   V: 14740851-14741333 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y50E8A.6.1 14738503 14741333 -1

1 Sequence

Length
2189

1 Sequence Ontology Term

Identifier Name Description
transcript