WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y50E8A.9c.1 Sequence Name  Y50E8A.9c.1
Length (nt)  1177   Chromosome Location  V: 14778331-14779744
Chromosome . Primary Identifier  V Chromosome Location . Start  14778331
Chromosome Location . End  14779744 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y50E8A.9c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013052 scrm-7 Y50E8A.9 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y50E8A.9c Y50E8A.9c 300   V: 14779369-14779424

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y50E8A.9c.1 14778331 14779744 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon208091   267   V: 14778331-14778597 Caenorhabditis elegans
Exon208093   187   V: 14778640-14778826 Caenorhabditis elegans
Exon208095   360   V: 14778928-14779287 Caenorhabditis elegans
Exon208096   89   V: 14779336-14779424 Caenorhabditis elegans
Exon208098   274   V: 14779471-14779744 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y50E8A.9c.1 14778331 14779744 -1

1 Sequence

Length
1177

1 Sequence Ontology Term

Identifier Name Description
transcript