WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y50E8A.10.1 Sequence Name  Y50E8A.10.1
Length (nt)  751   Chromosome Location  V: 14779996-14781114
Chromosome . Primary Identifier  V Chromosome Location . Start  14779996
Chromosome Location . End  14781114 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y50E8A.10.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013053 Y50E8A.10 Y50E8A.10 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y50E8A.10 Y50E8A.10 630   V: 14780081-14780134

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y50E8A.10.1 14779996 14781114 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon208101   139   V: 14779996-14780134 Caenorhabditis elegans
Exon208102   87   V: 14780187-14780273 Caenorhabditis elegans
Exon208103   246   V: 14780433-14780678 Caenorhabditis elegans
Exon208104   44   V: 14780721-14780764 Caenorhabditis elegans
Exon208105   128   V: 14780834-14780961 Caenorhabditis elegans
Exon208106   107   V: 14781008-14781114 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y50E8A.10.1 14779996 14781114 1

1 Sequence

Length
751

1 Sequence Ontology Term

Identifier Name Description
transcript