WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y50E8A.12c.1 Sequence Name  Y50E8A.12c.1
Length (nt)  494   Chromosome Location  V: 14783516-14784065
Chromosome . Primary Identifier  V Chromosome Location . Start  14783516
Chromosome Location . End  14784065 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y50E8A.12c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013055 Y50E8A.12 Y50E8A.12 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y50E8A.12c Y50E8A.12c 333   V: 14783613-14783820

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y50E8A.12c.1 14783516 14784065 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

2 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon208112   305   V: 14783516-14783820 Caenorhabditis elegans
Exon208114   189   V: 14783877-14784065 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y50E8A.12c.1 14783516 14784065 -1

1 Sequence

Length
494

1 Sequence Ontology Term

Identifier Name Description
transcript