WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C48G7.3a.1 Sequence Name  C48G7.3a.1
Length (nt)  6219   Chromosome Location  V: 14784151-14815600
Chromosome . Primary Identifier  V Chromosome Location . Start  14784151
Chromosome Location . End  14815600 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C48G7.3a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008183 rin-1 C48G7.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C48G7.3a C48G7.3a 5673   V: 14784641-14784794

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:C48G7.3a.1 14784151 14815600 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

25 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon208116   644   V: 14784151-14784794 Caenorhabditis elegans
Exon208125   469   V: 14785180-14785648 Caenorhabditis elegans
Exon208134   1122   V: 14786002-14787123 Caenorhabditis elegans
Exon208143   120   V: 14787178-14787297 Caenorhabditis elegans
Exon208153   169   V: 14787600-14787768 Caenorhabditis elegans
Exon208161   190   V: 14789510-14789699 Caenorhabditis elegans
Exon208170   549   V: 14795926-14796474 Caenorhabditis elegans
Exon208179   82   V: 14797522-14797603 Caenorhabditis elegans
Exon208184   174   V: 14798223-14798396 Caenorhabditis elegans
Exon208190   97   V: 14798971-14799067 Caenorhabditis elegans
Exon208194   172   V: 14799235-14799406 Caenorhabditis elegans
Exon208198   85   V: 14800805-14800889 Caenorhabditis elegans
Exon208202   120   V: 14801778-14801897 Caenorhabditis elegans
Exon208206   54   V: 14802124-14802177 Caenorhabditis elegans
Exon208210   181   V: 14803301-14803481 Caenorhabditis elegans
Exon208214   239   V: 14803754-14803992 Caenorhabditis elegans
Exon208219   147   V: 14804680-14804826 Caenorhabditis elegans
Exon208222   92   V: 14808479-14808570 Caenorhabditis elegans
Exon208225   71   V: 14809053-14809123 Caenorhabditis elegans
Exon208228   226   V: 14809239-14809464 Caenorhabditis elegans
Exon208231   188   V: 14810162-14810349 Caenorhabditis elegans
Exon208234   155   V: 14811356-14811510 Caenorhabditis elegans
Exon208239   131   V: 14813179-14813309 Caenorhabditis elegans
Exon208242   278   V: 14814163-14814440 Caenorhabditis elegans
Exon208243   464   V: 14815137-14815600 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:C48G7.3a.1 14784151 14815600 -1

1 Sequence

Length
6219

1 Sequence Ontology Term

Identifier Name Description
transcript