WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C48G7.3l.1 Sequence Name  C48G7.3l.1
Length (nt)  2844   Chromosome Location  V: 14784641-14797592
Chromosome . Primary Identifier  V Chromosome Location . Start  14784641
Chromosome Location . End  14797592 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C48G7.3l.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008183 rin-1 C48G7.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C48G7.3l C48G7.3l 2844   V: 14784641-14784794

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C48G7.3l.1 14784641 14797592 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon208120   154   V: 14784641-14784794 Caenorhabditis elegans
Exon208133   469   V: 14785180-14785648 Caenorhabditis elegans
Exon208142   1122   V: 14786002-14787123 Caenorhabditis elegans
Exon208151   120   V: 14787178-14787297 Caenorhabditis elegans
Exon208160   169   V: 14787600-14787768 Caenorhabditis elegans
Exon208168   190   V: 14789510-14789699 Caenorhabditis elegans
Exon208176   549   V: 14795926-14796474 Caenorhabditis elegans
Exon208178   71   V: 14797522-14797592 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C48G7.3l.1 14784641 14797592 -1

1 Sequence

Length
2844

1 Sequence Ontology Term

Identifier Name Description
transcript