WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:C48G7.3f Sequence Name  C48G7.3f
Length (nt)  5238   Chromosome Location  V: 14784641-14784794
Chromosome . Primary Identifier  V Chromosome Location . Start  14784641
Chromosome Location . End  14784794
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C48G7.3f

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE44746 RIN-1, isoform f 191.1 1745 Caenorhabditis elegans
 

Other

8 RNAi

WormBase ID
WBRNAi00042749
WBRNAi00042750
WBRNAi00042751
WBRNAi00012105
WBRNAi00012106
WBRNAi00020850
WBRNAi00029951
WBRNAi00029952

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:C48G7.3f 14784641 14784794 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008183 rin-1 C48G7.3 Caenorhabditis elegans

24 Locations


Feature . Primary Identifier
Start End Strand
CDS:C48G7.3f 14784641 14784794 -1
CDS:C48G7.3f 14785180 14785648 -1
CDS:C48G7.3f 14786002 14787123 -1
CDS:C48G7.3f 14787178 14787297 -1
CDS:C48G7.3f 14787600 14787768 -1
CDS:C48G7.3f 14789510 14789699 -1
CDS:C48G7.3f 14795926 14796474 -1
CDS:C48G7.3f 14797522 14797603 -1
CDS:C48G7.3f 14798223 14798396 -1
CDS:C48G7.3f 14798971 14799067 -1
CDS:C48G7.3f 14799235 14799406 -1
CDS:C48G7.3f 14800805 14800889 -1
CDS:C48G7.3f 14801778 14801897 -1
CDS:C48G7.3f 14802124 14802177 -1
CDS:C48G7.3f 14803301 14803481 -1
CDS:C48G7.3f 14803754 14803992 -1
CDS:C48G7.3f 14804680 14804826 -1
CDS:C48G7.3f 14808479 14808570 -1
CDS:C48G7.3f 14809053 14809123 -1
CDS:C48G7.3f 14809239 14809464 -1
CDS:C48G7.3f 14810162 14810349 -1
CDS:C48G7.3f 14811356 14811510 -1
CDS:C48G7.3f 14813179 14813309 -1
CDS:C48G7.3f 14814163 14814413 -1

1 Sequence

Length
5238

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:C48G7.3f.1 C48G7.3f.1 5238   V: 14784641-14814413