WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:W06A7.3f.1 Sequence Name  W06A7.3f.1
Length (nt)  10331   Chromosome Location  V: 14829177-14847312
Chromosome . Primary Identifier  V Chromosome Location . Start  14829177
Chromosome Location . End  14847312 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
W06A7.3f.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004336 ret-1 W06A7.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:W06A7.3f W06A7.3f 9912   V: 14829596-14829662

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:W06A7.3f.1 14829177 14847312 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon208270   486   V: 14829177-14829662 Caenorhabditis elegans
Exon208285   384   V: 14829739-14830122 Caenorhabditis elegans
Exon208292   151   V: 14830167-14830317 Caenorhabditis elegans
Exon208303   81   V: 14833635-14833715 Caenorhabditis elegans
Exon208308   814   V: 14833759-14834572 Caenorhabditis elegans
Exon208311   81   V: 14836337-14836417 Caenorhabditis elegans
Exon208315   291   V: 14838082-14838372 Caenorhabditis elegans
Exon208318   119   V: 14838431-14838549 Caenorhabditis elegans
Exon208320   7827   V: 14838770-14846596 Caenorhabditis elegans
Exon208321   97   V: 14847216-14847312 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:W06A7.3f.1 14829177 14847312 -1

1 Sequence

Length
10331

1 Sequence Ontology Term

Identifier Name Description
transcript