WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:H12D21.7b Sequence Name  H12D21.7b
Length (nt)  1059   Chromosome Location  V: 14895864-14896052
Chromosome . Primary Identifier  V Chromosome Location . Start  14895864
Chromosome Location . End  14896052
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
H12D21.7b

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE47459 MPST-3, isoform b 38.6 352 Caenorhabditis elegans
 

Other

3 RNAi

WormBase ID
WBRNAi00049379
WBRNAi00016246
WBRNAi00016247

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:H12D21.7b 14895864 14896052 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010383 mpst-3 H12D21.7 Caenorhabditis elegans

6 Locations


Feature . Primary Identifier
Start End Strand
CDS:H12D21.7b 14895864 14896052 1
CDS:H12D21.7b 14896199 14896303 1
CDS:H12D21.7b 14897046 14897270 1
CDS:H12D21.7b 14898243 14898501 1
CDS:H12D21.7b 14898610 14898827 1
CDS:H12D21.7b 14898884 14898946 1

1 Sequence

Length
1059

1 Sequence Ontology Term

Identifier Name Description
CDS  

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:H12D21.7b.1 H12D21.7b.1 1200   V: 14895668-14898946
Transcript:H12D21.7b.2 H12D21.7b.2 1233   V: 14895690-14898946