WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:W09D12.1a.1 Sequence Name  W09D12.1a.1
Length (nt)  1499   Chromosome Location  V: 14917735-14921609
Chromosome . Primary Identifier  V Chromosome Location . Start  14917735
Chromosome Location . End  14921609 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
W09D12.1a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012364 zmp-4 W09D12.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:W09D12.1a W09D12.1a 1419   V: 14917807-14917881

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:W09D12.1a.1 14917735 14921609 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon208504   147   V: 14917735-14917881 Caenorhabditis elegans
Exon208505   156   V: 14917925-14918080 Caenorhabditis elegans
Exon208507   97   V: 14918214-14918310 Caenorhabditis elegans
Exon208509   205   V: 14918558-14918762 Caenorhabditis elegans
Exon208511   84   V: 14918837-14918920 Caenorhabditis elegans
Exon208514   98   V: 14919736-14919833 Caenorhabditis elegans
Exon208515   160   V: 14920206-14920365 Caenorhabditis elegans
Exon208516   125   V: 14920413-14920537 Caenorhabditis elegans
Exon208517   88   V: 14920581-14920668 Caenorhabditis elegans
Exon208518   119   V: 14920866-14920984 Caenorhabditis elegans
Exon208519   98   V: 14921030-14921127 Caenorhabditis elegans
Exon208520   122   V: 14921488-14921609 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:W09D12.1a.1 14917735 14921609 -1

1 Sequence

Length
1499

1 Sequence Ontology Term

Identifier Name Description
transcript