WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:W09D12.3.1 Sequence Name  W09D12.3.1
Length (nt)  912   Chromosome Location  V: 14921988-14924204
Chromosome . Primary Identifier  V Chromosome Location . Start  14921988
Chromosome Location . End  14924204 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
W09D12.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00005211 srg-54 W09D12.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:W09D12.3 W09D12.3 912   V: 14921988-14922107

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:W09D12.3.1 14921988 14924204 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon208521   120   V: 14921988-14922107 Caenorhabditis elegans
Exon208522   90   V: 14922356-14922445 Caenorhabditis elegans
Exon208523   207   V: 14922492-14922698 Caenorhabditis elegans
Exon208524   141   V: 14922748-14922888 Caenorhabditis elegans
Exon208525   82   V: 14922955-14923036 Caenorhabditis elegans
Exon208526   131   V: 14923087-14923217 Caenorhabditis elegans
Exon208527   141   V: 14924064-14924204 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:W09D12.3.1 14921988 14924204 -1

1 Sequence

Length
912

1 Sequence Ontology Term

Identifier Name Description
transcript