WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T01C3.1.2 Sequence Name  T01C3.1.2
Length (nt)  2262   Chromosome Location  V: 14987547-14990925
Chromosome . Primary Identifier  V Chromosome Location . Start  14987547
Chromosome Location . End  14990925 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T01C3.1.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011318 cdt-2 T01C3.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T01C3.1 T01C3.1 2049   V: 14987747-14987969

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T01C3.1.2 14987547 14990925 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon208602   423   V: 14987547-14987969 Caenorhabditis elegans
Exon208604   303   V: 14988021-14988323 Caenorhabditis elegans
Exon208606   607   V: 14988750-14989356 Caenorhabditis elegans
Exon208608   459   V: 14989841-14990299 Caenorhabditis elegans
Exon208610   195   V: 14990353-14990547 Caenorhabditis elegans
Exon208612   145   V: 14990599-14990743 Caenorhabditis elegans
Exon208614   130   V: 14990796-14990925 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T01C3.1.2 14987547 14990925 -1

1 Sequence

Length
2262

1 Sequence Ontology Term

Identifier Name Description
transcript