WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T01C3.10a.1 Sequence Name  T01C3.10a.1
Length (nt)  3068   Chromosome Location  V: 15006341-15011660
Chromosome . Primary Identifier  V Chromosome Location . Start  15006341
Chromosome Location . End  15011660 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T01C3.10a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003775 nmr-2 T01C3.10 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T01C3.10a T01C3.10a 2973   V: 15006412-15006496

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:T01C3.10a.1 15006341 15011660 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

20 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon208668   156   V: 15006341-15006496 Caenorhabditis elegans
Exon208670   122   V: 15006546-15006667 Caenorhabditis elegans
Exon208672   105   V: 15006714-15006818 Caenorhabditis elegans
Exon208674   131   V: 15006866-15006996 Caenorhabditis elegans
Exon208676   182   V: 15007280-15007461 Caenorhabditis elegans
Exon208678   75   V: 15007511-15007585 Caenorhabditis elegans
Exon208680   92   V: 15007638-15007729 Caenorhabditis elegans
Exon208682   149   V: 15007772-15007920 Caenorhabditis elegans
Exon208684   72   V: 15008423-15008494 Caenorhabditis elegans
Exon208686   238   V: 15008596-15008833 Caenorhabditis elegans
Exon208689   196   V: 15008880-15009075 Caenorhabditis elegans
Exon208690   56   V: 15009122-15009177 Caenorhabditis elegans
Exon208691   340   V: 15009289-15009628 Caenorhabditis elegans
Exon208692   184   V: 15009689-15009872 Caenorhabditis elegans
Exon208693   127   V: 15010033-15010159 Caenorhabditis elegans
Exon208694   139   V: 15010202-15010340 Caenorhabditis elegans
Exon208695   132   V: 15010385-15010516 Caenorhabditis elegans
Exon208696   321   V: 15010562-15010882 Caenorhabditis elegans
Exon208697   80   V: 15010930-15011009 Caenorhabditis elegans
Exon208698   171   V: 15011490-15011660 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:T01C3.10a.1 15006341 15011660 -1

1 Sequence

Length
3068

1 Sequence Ontology Term

Identifier Name Description
transcript