WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T01C3.10b.1 Sequence Name  T01C3.10b.1
Length (nt)  1290   Chromosome Location  V: 15006412-15008918
Chromosome . Primary Identifier  V Chromosome Location . Start  15006412
Chromosome Location . End  15008918 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T01C3.10b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003775 nmr-2 T01C3.10 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T01C3.10b T01C3.10b 1290   V: 15006412-15006496

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T01C3.10b.1 15006412 15008918 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon208669   85   V: 15006412-15006496 Caenorhabditis elegans
Exon208671   122   V: 15006546-15006667 Caenorhabditis elegans
Exon208673   105   V: 15006714-15006818 Caenorhabditis elegans
Exon208675   131   V: 15006866-15006996 Caenorhabditis elegans
Exon208677   182   V: 15007280-15007461 Caenorhabditis elegans
Exon208679   75   V: 15007511-15007585 Caenorhabditis elegans
Exon208681   92   V: 15007638-15007729 Caenorhabditis elegans
Exon208683   149   V: 15007772-15007920 Caenorhabditis elegans
Exon208685   72   V: 15008423-15008494 Caenorhabditis elegans
Exon208687   238   V: 15008596-15008833 Caenorhabditis elegans
Exon208688   39   V: 15008880-15008918 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T01C3.10b.1 15006412 15008918 -1

1 Sequence

Length
1290

1 Sequence Ontology Term

Identifier Name Description
transcript