WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T01C3.8a.1 Sequence Name  T01C3.8a.1
Length (nt)  2054   Chromosome Location  V: 15002543-15005067
Chromosome . Primary Identifier  V Chromosome Location . Start  15002543
Chromosome Location . End  15005067 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T01C3.8a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011323 mut-15 T01C3.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T01C3.8a T01C3.8a 1626   V: 15002713-15002749

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T01C3.8a.1 15002543 15005067 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon208699   207   V: 15002543-15002749 Caenorhabditis elegans
Exon208700   68   V: 15002799-15002866 Caenorhabditis elegans
Exon208701   46   V: 15002909-15002954 Caenorhabditis elegans
Exon208702   73   V: 15003002-15003074 Caenorhabditis elegans
Exon208704   169   V: 15003122-15003290 Caenorhabditis elegans
Exon208706   476   V: 15003333-15003808 Caenorhabditis elegans
Exon208708   124   V: 15003857-15003980 Caenorhabditis elegans
Exon208710   106   V: 15004026-15004131 Caenorhabditis elegans
Exon208712   130   V: 15004176-15004305 Caenorhabditis elegans
Exon208714   271   V: 15004359-15004629 Caenorhabditis elegans
Exon208717   384   V: 15004684-15005067 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T01C3.8a.1 15002543 15005067 1

1 Sequence

Length
2054

1 Sequence Ontology Term

Identifier Name Description
transcript