WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T01C3.10a.1 Sequence Name  T01C3.10a.1
Length (nt)  3068   Chromosome Location  V: 15006341-15011660
Chromosome . Primary Identifier  V Chromosome Location . Start  15006341
Chromosome Location . End  15011660 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T01C3.10a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003775 nmr-2 T01C3.10 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T01C3.10a T01C3.10a 2973   V: 15006412-15006496

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:T01C3.10a.1 15006341 15011660 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

20 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon208722   156   V: 15006341-15006496 Caenorhabditis elegans
Exon208724   122   V: 15006546-15006667 Caenorhabditis elegans
Exon208726   105   V: 15006714-15006818 Caenorhabditis elegans
Exon208728   131   V: 15006866-15006996 Caenorhabditis elegans
Exon208730   182   V: 15007280-15007461 Caenorhabditis elegans
Exon208732   75   V: 15007511-15007585 Caenorhabditis elegans
Exon208734   92   V: 15007638-15007729 Caenorhabditis elegans
Exon208736   149   V: 15007772-15007920 Caenorhabditis elegans
Exon208738   72   V: 15008423-15008494 Caenorhabditis elegans
Exon208740   238   V: 15008596-15008833 Caenorhabditis elegans
Exon208743   196   V: 15008880-15009075 Caenorhabditis elegans
Exon208744   56   V: 15009122-15009177 Caenorhabditis elegans
Exon208745   340   V: 15009289-15009628 Caenorhabditis elegans
Exon208746   184   V: 15009689-15009872 Caenorhabditis elegans
Exon208747   127   V: 15010033-15010159 Caenorhabditis elegans
Exon208748   139   V: 15010202-15010340 Caenorhabditis elegans
Exon208749   132   V: 15010385-15010516 Caenorhabditis elegans
Exon208750   321   V: 15010562-15010882 Caenorhabditis elegans
Exon208751   80   V: 15010930-15011009 Caenorhabditis elegans
Exon208752   171   V: 15011490-15011660 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:T01C3.10a.1 15006341 15011660 -1

1 Sequence

Length
3068

1 Sequence Ontology Term

Identifier Name Description
transcript