WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C25D7.3.1 Sequence Name  C25D7.3.1
Length (nt)  6774   Chromosome Location  V: 15039148-15048207
Chromosome . Primary Identifier  V Chromosome Location . Start  15039148
Chromosome Location . End  15048207 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C25D7.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004747 sdc-3 C25D7.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C25D7.3 C25D7.3 6453   V: 15039357-15039585

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C25D7.3.1 15039148 15048207 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

15 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon208823   438   V: 15039148-15039585 Caenorhabditis elegans
Exon208824   278   V: 15039671-15039948 Caenorhabditis elegans
Exon208825   222   V: 15040149-15040370 Caenorhabditis elegans
Exon208826   65   V: 15040414-15040478 Caenorhabditis elegans
Exon208827   102   V: 15040528-15040629 Caenorhabditis elegans
Exon208828   449   V: 15040682-15041130 Caenorhabditis elegans
Exon208829   916   V: 15041456-15042371 Caenorhabditis elegans
Exon208830   345   V: 15042417-15042761 Caenorhabditis elegans
Exon208831   2934   V: 15042812-15045745 Caenorhabditis elegans
Exon208832   141   V: 15046068-15046208 Caenorhabditis elegans
Exon208833   313   V: 15046386-15046698 Caenorhabditis elegans
Exon208834   155   V: 15046753-15046907 Caenorhabditis elegans
Exon208835   96   V: 15046955-15047050 Caenorhabditis elegans
Exon208836   218   V: 15047584-15047801 Caenorhabditis elegans
Exon208837   102   V: 15048106-15048207 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C25D7.3.1 15039148 15048207 -1

1 Sequence

Length
6774

1 Sequence Ontology Term

Identifier Name Description
transcript