WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C25D7.3.1 Sequence Name  C25D7.3.1
Length (nt)  6774   Chromosome Location  V: 15039148-15048207
Chromosome . Primary Identifier  V Chromosome Location . Start  15039148
Chromosome Location . End  15048207 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C25D7.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004747 sdc-3 C25D7.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C25D7.3 C25D7.3 6453   V: 15039357-15039585

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C25D7.3.1 15039148 15048207 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

15 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon208803   438   V: 15039148-15039585 Caenorhabditis elegans
Exon208804   278   V: 15039671-15039948 Caenorhabditis elegans
Exon208805   222   V: 15040149-15040370 Caenorhabditis elegans
Exon208806   65   V: 15040414-15040478 Caenorhabditis elegans
Exon208807   102   V: 15040528-15040629 Caenorhabditis elegans
Exon208808   449   V: 15040682-15041130 Caenorhabditis elegans
Exon208809   916   V: 15041456-15042371 Caenorhabditis elegans
Exon208810   345   V: 15042417-15042761 Caenorhabditis elegans
Exon208811   2934   V: 15042812-15045745 Caenorhabditis elegans
Exon208812   141   V: 15046068-15046208 Caenorhabditis elegans
Exon208813   313   V: 15046386-15046698 Caenorhabditis elegans
Exon208814   155   V: 15046753-15046907 Caenorhabditis elegans
Exon208815   96   V: 15046955-15047050 Caenorhabditis elegans
Exon208816   218   V: 15047584-15047801 Caenorhabditis elegans
Exon208817   102   V: 15048106-15048207 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C25D7.3.1 15039148 15048207 -1

1 Sequence

Length
6774

1 Sequence Ontology Term

Identifier Name Description
transcript