WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:C25D7.8 Sequence Name  C25D7.8
Length (nt)  855   Chromosome Location  V: 15066310-15066420
Chromosome . Primary Identifier  V Chromosome Location . Start  15066310
Chromosome Location . End  15066420
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C25D7.8

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE08394 OTUB-1 32.3 284 Caenorhabditis elegans
 

Other

5 RNAi

WormBase ID
WBRNAi00041176
WBRNAi00041177
WBRNAi00011156
WBRNAi00029190
WBRNAi00062133

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:C25D7.8 15066310 15066420 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007718 otub-1 C25D7.8 Caenorhabditis elegans

2 Locations


Feature . Primary Identifier
Start End Strand
CDS:C25D7.8 15066310 15066420 1
CDS:C25D7.8 15066471 15067214 1

1 Sequence

Length
855

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:C25D7.8.1 C25D7.8.1 1005   V: 15066298-15067352