WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C01G10.12.1 Sequence Name  C01G10.12.1
Length (nt)  627   Chromosome Location  V: 15068678-15069507
Chromosome . Primary Identifier  V Chromosome Location . Start  15068678
Chromosome Location . End  15069507 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C01G10.12.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001021 dnj-3 C01G10.12 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C01G10.12 C01G10.12 576   V: 15068690-15068821

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C01G10.12.1 15068678 15069507 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon208863   144   V: 15068678-15068821 Caenorhabditis elegans
Exon208864   180   V: 15068866-15069045 Caenorhabditis elegans
Exon208865   122   V: 15069096-15069217 Caenorhabditis elegans
Exon208866   105   V: 15069272-15069376 Caenorhabditis elegans
Exon208867   76   V: 15069432-15069507 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C01G10.12.1 15068678 15069507 1

1 Sequence

Length
627

1 Sequence Ontology Term

Identifier Name Description
transcript