WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C01G10.10a.1 Sequence Name  C01G10.10a.1
Length (nt)  1321   Chromosome Location  V: 15080134-15082441
Chromosome . Primary Identifier  V Chromosome Location . Start  15080134
Chromosome Location . End  15082441 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C01G10.10a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007237 C01G10.10 C01G10.10 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C01G10.10a C01G10.10a 1266   V: 15080168-15080375

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C01G10.10a.1 15080134 15082441 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon208912   242   V: 15080134-15080375 Caenorhabditis elegans
Exon208914   115   V: 15080425-15080539 Caenorhabditis elegans
Exon208916   127   V: 15080590-15080716 Caenorhabditis elegans
Exon208918   287   V: 15081335-15081621 Caenorhabditis elegans
Exon208920   164   V: 15081742-15081905 Caenorhabditis elegans
Exon208922   149   V: 15081958-15082106 Caenorhabditis elegans
Exon208924   124   V: 15082151-15082274 Caenorhabditis elegans
Exon208927   113   V: 15082329-15082441 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C01G10.10a.1 15080134 15082441 -1

1 Sequence

Length
1321

1 Sequence Ontology Term

Identifier Name Description
transcript