WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C01G10.1.1 Sequence Name  C01G10.1.1
Length (nt)  3828   Chromosome Location  V: 15099747-15104405
Chromosome . Primary Identifier  V Chromosome Location . Start  15099747
Chromosome Location . End  15104405 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C01G10.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007230 C01G10.1 C01G10.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C01G10.1 C01G10.1 3642   V: 15099962-15100022

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C01G10.1.1 15099747 15104405 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon208979   144   V: 15099747-15099890 Caenorhabditis elegans
Exon208980   87   V: 15099936-15100022 Caenorhabditis elegans
Exon208981   1633   V: 15100368-15102000 Caenorhabditis elegans
Exon208982   121   V: 15102047-15102167 Caenorhabditis elegans
Exon208983   415   V: 15102211-15102625 Caenorhabditis elegans
Exon208984   371   V: 15102696-15103066 Caenorhabditis elegans
Exon208985   115   V: 15103115-15103229 Caenorhabditis elegans
Exon208986   225   V: 15103275-15103499 Caenorhabditis elegans
Exon208987   101   V: 15103550-15103650 Caenorhabditis elegans
Exon208988   316   V: 15103699-15104014 Caenorhabditis elegans
Exon208989   140   V: 15104064-15104203 Caenorhabditis elegans
Exon208990   160   V: 15104246-15104405 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C01G10.1.1 15099747 15104405 1

1 Sequence

Length
3828

1 Sequence Ontology Term

Identifier Name Description
transcript