WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:T01G5.1 Sequence Name  T01G5.1
Length (nt)  1401   Chromosome Location  V: 15116908-15116997
Chromosome . Primary Identifier  V Chromosome Location . Start  15116908
Chromosome Location . End  15116997
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T01G5.1

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE45138 FLOR-1 53.2 466 Caenorhabditis elegans
 

Other

4 RNAi

WormBase ID
WBRNAi00067772
WBRNAi00052140
WBRNAi00017980
WBRNAi00035022

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:T01G5.1 15116908 15116997 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011339 flor-1 T01G5.1 Caenorhabditis elegans

9 Locations


Feature . Primary Identifier
Start End Strand
CDS:T01G5.1 15116908 15116997 -1
CDS:T01G5.1 15117042 15117147 -1
CDS:T01G5.1 15117417 15117635 -1
CDS:T01G5.1 15117685 15117794 -1
CDS:T01G5.1 15117841 15118084 -1
CDS:T01G5.1 15118128 15118245 -1
CDS:T01G5.1 15118499 15118800 -1
CDS:T01G5.1 15119024 15119197 -1
CDS:T01G5.1 15119563 15119600 -1

1 Sequence

Length
1401

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:T01G5.1.1 T01G5.1.1 1482   V: 15116844-15119617