WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:T01G5.2 Sequence Name  T01G5.2
Length (nt)  1608   Chromosome Location  V: 15121847-15122030
Chromosome . Primary Identifier  V Chromosome Location . Start  15121847
Chromosome Location . End  15122030
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T01G5.2

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE12976 UGT-30 60.8 535 Caenorhabditis elegans
 

Other

3 RNAi

WormBase ID
WBRNAi00052141
WBRNAi00017981
WBRNAi00035023

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:T01G5.2 15121847 15122030 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011340 ugt-30 T01G5.2 Caenorhabditis elegans

6 Locations


Feature . Primary Identifier
Start End Strand
CDS:T01G5.2 15121847 15122030 -1
CDS:T01G5.2 15122304 15122759 -1
CDS:T01G5.2 15123014 15123333 -1
CDS:T01G5.2 15123492 15123905 -1
CDS:T01G5.2 15123960 15124043 -1
CDS:T01G5.2 15125039 15125188 -1

1 Sequence

Length
1608

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:T01G5.2.1 T01G5.2.1 1805   V: 15121724-15125262