WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:T01G5.5 Sequence Name  T01G5.5
Length (nt)  1029   Chromosome Location  V: 15130497-15130760
Chromosome . Primary Identifier  V Chromosome Location . Start  15130497
Chromosome Location . End  15130760
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T01G5.5

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE12982 STR-171 38.9 342 Caenorhabditis elegans
 

Other

4 RNAi

WormBase ID
WBRNAi00052144
WBRNAi00017984
WBRNAi00091037
WBRNAi00035024

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:T01G5.5 15130497 15130760 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006215 str-171 T01G5.5 Caenorhabditis elegans

4 Locations


Feature . Primary Identifier
Start End Strand
CDS:T01G5.5 15130497 15130760 -1
CDS:T01G5.5 15130811 15131075 -1
CDS:T01G5.5 15131706 15131919 -1
CDS:T01G5.5 15132231 15132516 -1

1 Sequence

Length
1029

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:T01G5.5.1 T01G5.5.1 1149   V: 15130384-15132523