WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T10H4.12.1 Sequence Name  T10H4.12.1
Length (nt)  1369   Chromosome Location  V: 15296834-15298700
Chromosome . Primary Identifier  V Chromosome Location . Start  15296834
Chromosome Location . End  15298700 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T10H4.12.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000783 cpr-3 T10H4.12 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T10H4.12 T10H4.12 1113   V: 15297006-15297098

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T10H4.12.1 15296834 15298700 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon209424   265   V: 15296834-15297098 Caenorhabditis elegans
Exon209425   332   V: 15297143-15297474 Caenorhabditis elegans
Exon209426   667   V: 15297881-15298547 Caenorhabditis elegans
Exon209427   105   V: 15298596-15298700 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T10H4.12.1 15296834 15298700 -1

1 Sequence

Length
1369

1 Sequence Ontology Term

Identifier Name Description
transcript