WormMine: Gene WBGene00045514

• WormBase Gene ID: WBGene00045514
• Gene Name: ZK1037.12
• Sequence Name: ZK1037.12
• Organism: Caenorhabditis elegans
• Automated Description: Is affected by etr-1; qui-1; and ogt-1 based on RNA-seq studies.
• Biotype: SO:0000336
• Genetic Position: :±
• Length (nt): 318

1 Organism

• Name: Caenorhabditis elegans
• Taxon Id: 6239

1 Synonyms

• Value: WBGene00045514

Genomics

0 Transcripts

Other

0 CDSs

0 RNAi Result

24 Allele

• gk963271
• gk963301
• gk964458
• gk964459
• gk964389
• WBVar02123699
• WBVar02123127
• WBVar02124055
• gk964036
• WBVar02124258
• WBVar01975694
• WBVar01776643
• WBVar01776641
• gk963937
• WBVar01776642
• WBVar00019875
• WBVar01776640
• gk850765
• gk514284
• gk661092
• WBVar02121278
• WBVar02078602
• gk255518
• WBVar02122852

1 Chromosome

• WormBase ID: V
• Organism: Caenorhabditis elegans
• Length (nt): 20924180

1 Chromosome Location

• Feature . Primary Identifier: WBGene00045514
• Start: 15310120
• End: 15310437
• Strand: 1

2 Data Sets

• WormBaseAcedbConverter
• C. elegans genomic annotations (GFF3 Gene)

1 Downstream Intergenic Region

• WormBase ID: intergenic_region_chrV_15310438..15311079
• Length (nt): 642
• Chromosome Location: V: 15310438-15311079
• Organism: Caenorhabditis elegans

4 Expression Clusters

Regulated By Treatment	Description	Algorithm	Primary Identifier
	Genes that showed increased expression after germline ablation comparing to un-ablated animals.	The differential expression between germline-ablated versus gonad-ablated animals was computed via the functions makeContrasts and contrasts.fit in the limma package in R/Bioconductor.	WBPaper00045571:germline-ablation_upregulated
	Transcripts that showed significantly decreased expression in ogt-1(ok1474) neuronal cells isolated by FACs comparing to in FACs isolated neuronal cells from wild type.	DESeq2, fold change > 2, FDR < 0.05.	WBPaper00066485:ogt-1(ok1474)_downregulated_neuron
	Transcripts that showed significantly decreased expression in ADL neurons of qui-1(db104) comparing to in N2 at day 1 adult stage.	tximport 1.14.2 and DEseq2 1.26.0. Fold change > 2, FDR < 0.05.	WBPaper00062520:qui-1(db104)_downregulated
	Transcripts of noncoding genes that showed significantly decreased expression in muscle.	DESeq2 (version 1.24.0). Transcripts with a false-discovery rate adjusted p-value less than 0.05 were considered significantly differentially expressed.	WBPaper00062325:muscle_depleted_noncoding-RNA

0 Expression Patterns

0 GO Annotation

0 Homologues

1 Locations

• Feature . Primary Identifier: WBGene00045514
• Start: 15310120
• End: 15310437
• Strand: 1

0 Ontology Annotations

0 Regulates Expr Cluster

1 Sequence

• Length: 318

1 Sequence Ontology Term