WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00014993 Gene Name  ZK1037.2
Sequence Name  ? ZK1037.2 Organism  Caenorhabditis elegans
Automated Description  Is affected by resveratrol based on microarray studies. Biotype  SO:0000336
Genetic Position  Length (nt)  ? 1249
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
WBGene00014993

Genomics

0 Transcripts

 

Other

0 CDSs

0 RNAi Result

64 Allele

Public Name
gk963271
gk963301
gk964458
gk964459
gk964389
WBVar02123699
gk964036
WBVar02124258
gk963937
WBVar02121278
WBVar02122852
WBVar02024779
WBVar02024780
h13452
WBVar01873732
WBVar01873733
WBVar01873734
WBVar01873735
WBVar01873736
gk255520
WBVar02038850
WBVar01776729
WBVar01776730
WBVar01776723
WBVar01776724
WBVar01776721
WBVar01776722
WBVar01776727
WBVar01776728
WBVar01776725

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
WBGene00014993 15312982 15314230 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

1 Downstream Intergenic Region

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
intergenic_region_chrV_15312537..15312981   445 V: 15312537-15312981 Caenorhabditis elegans

6 Expression Clusters

Regulated By Treatment Description Algorithm Primary Identifier
Reduced humidity (98% relative humidity). Genes that were down-regulated after one day exposure to reduced humidity (98% relative humidity) according to microarray analysis. Multiple hypothesis testing with the Benjamini-Hochberg correction was applied on calculated p-values. A change in the expression level was considered to be significant if the adjusted p-value was less than 0.001. WBPaper00044578:reduced-humidity_downregulated_microarray
  Transcripts that showed significantly increased expression in daf-2(e1370) neurons comparing to in N2 neurons at day 8adult stage. DESeq2, FDR < 0.05, fold change > 2. WBPaper00066978:daf-2(e1370)_upregulated_neuron
  Transcripts that showed significantly increased expression in daf-16(mu86);daf-2(e1370) neurons comparing to in daf-2(e1370) neurons at day 8adult stage. DESeq2, FDR < 0.05, fold change > 2. WBPaper00066978:daf-16(mu86)_upregulated_neuron
  Genome-wide analysis of developmental and sex-regulated gene expression profile. self-organizing map cgc4489_group_11
Bacteria infection: Bacillus thuringiensis Transcripts that showed significantly decreased expression in N2 animals infected by bacteria BMB171/Cry5Ba, an acrystalliferous Bt mutant BMB171 transformed with toxin gene cry5Ba on the shuttle vector pHT304, comparing to N2 animals infected by BMB171/pHT304. N.A. WBPaper00064229:B.thuringiensis-Cry5Ba_downregulated
  Genes found to be regulated in daf-16(mgDf50) by resveratrol treatment with p < 0.01. N.A. WBPaper00026929:Resveratrol_regulated_daf-16

0 Expression Patterns

0 GO Annotation

0 Homologues

1 Locations


Feature . Primary Identifier
Start End Strand
WBGene00014993 15312982 15314230 -1

0 Ontology Annotations

0 Regulates Expr Cluster

1 Sequence

Length
1249

1 Sequence Ontology Term