WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:ZK1037.4b.1 Sequence Name  ZK1037.4b.1
Length (nt)  1178   Chromosome Location  V: 15316477-15318524
Chromosome . Primary Identifier  V Chromosome Location . Start  15316477
Chromosome Location . End  15318524 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZK1037.4b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00014192 nhr-246 ZK1037.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZK1037.4b ZK1037.4b 1059   V: 15316497-15316592

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:ZK1037.4b.1 15316477 15318524 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon209518   116   V: 15316477-15316592 Caenorhabditis elegans
Exon209522   130   V: 15316912-15317041 Caenorhabditis elegans
Exon209524   140   V: 15317089-15317228 Caenorhabditis elegans
Exon209526   87   V: 15317271-15317357 Caenorhabditis elegans
Exon209528   160   V: 15317403-15317562 Caenorhabditis elegans
Exon209530   266   V: 15317888-15318153 Caenorhabditis elegans
Exon209532   84   V: 15318200-15318283 Caenorhabditis elegans
Exon209534   195   V: 15318330-15318524 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:ZK1037.4b.1 15316477 15318524 1

1 Sequence

Length
1178

1 Sequence Ontology Term

Identifier Name Description
transcript