WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:C29F3.1 Sequence Name  C29F3.1
Length (nt)  2268   Chromosome Location  V: 15357792-15358083
Chromosome . Primary Identifier  V Chromosome Location . Start  15357792
Chromosome Location . End  15358083
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C29F3.1

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE08435 ECH-1.1 81.9 755 Caenorhabditis elegans
 

Other

7 RNAi

WormBase ID
WBRNAi00041460
WBRNAi00011330
WBRNAi00029316
WBRNAi00092839
WBRNAi00102614
WBRNAi00092838
WBRNAi00114314

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:C29F3.1 15357792 15358083 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001150 ech-1.1 C29F3.1 Caenorhabditis elegans

5 Locations


Feature . Primary Identifier
Start End Strand
CDS:C29F3.1 15357792 15358083 -1
CDS:C29F3.1 15358438 15358961 -1
CDS:C29F3.1 15359010 15359510 -1
CDS:C29F3.1 15359746 15360486 -1
CDS:C29F3.1 15360529 15360738 -1

1 Sequence

Length
2268

1 Sequence Ontology Term

Identifier Name Description
CDS  

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:C29F3.1.2 C29F3.1.2 2519   V: 15357664-15361512
Transcript:C29F3.1.1 C29F3.1.1 2383   V: 15357677-15360738