WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R08H2.9.1 Sequence Name  R08H2.9.1
Length (nt)  1005   Chromosome Location  V: 15368470-15369807
Chromosome . Primary Identifier  V Chromosome Location . Start  15368470
Chromosome Location . End  15369807 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R08H2.9.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011150 nhr-269 R08H2.9 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R08H2.9 R08H2.9 1005   V: 15368470-15368714

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:R08H2.9.1 15368470 15369807 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon209586   245   V: 15368470-15368714 Caenorhabditis elegans
Exon209587   113   V: 15368797-15368909 Caenorhabditis elegans
Exon209588   251   V: 15368959-15369209 Caenorhabditis elegans
Exon209589   176   V: 15369312-15369487 Caenorhabditis elegans
Exon209590   66   V: 15369543-15369608 Caenorhabditis elegans
Exon209591   154   V: 15369654-15369807 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:R08H2.9.1 15368470 15369807 -1

1 Sequence

Length
1005

1 Sequence Ontology Term

Identifier Name Description
transcript