WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T06E6.3.1 Sequence Name  T06E6.3.1
Length (nt)  819   Chromosome Location  V: 15397385-15398828
Chromosome . Primary Identifier  V Chromosome Location . Start  15397385
Chromosome Location . End  15398828 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T06E6.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00005931 fbxa-199 T06E6.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T06E6.3 T06E6.3 819   V: 15397385-15397520

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T06E6.3.1 15397385 15398828 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon209649   136   V: 15397385-15397520 Caenorhabditis elegans
Exon209650   131   V: 15397562-15397692 Caenorhabditis elegans
Exon209651   212   V: 15398058-15398269 Caenorhabditis elegans
Exon209652   224   V: 15398320-15398543 Caenorhabditis elegans
Exon209653   116   V: 15398713-15398828 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T06E6.3.1 15397385 15398828 -1

1 Sequence

Length
819

1 Sequence Ontology Term

Identifier Name Description
transcript