WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T26H5.8.1 Sequence Name  T26H5.8.1
Length (nt)  1547   Chromosome Location  V: 15427145-15432726
Chromosome . Primary Identifier  V Chromosome Location . Start  15427145
Chromosome Location . End  15432726 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T26H5.8.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012070 T26H5.8 T26H5.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T26H5.8 T26H5.8 1098   V: 15427305-15427394

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T26H5.8.1 15427145 15432726 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon209712   250   V: 15427145-15427394 Caenorhabditis elegans
Exon209713   92   V: 15427443-15427534 Caenorhabditis elegans
Exon209715   79   V: 15427579-15427657 Caenorhabditis elegans
Exon209717   86   V: 15427703-15427788 Caenorhabditis elegans
Exon209719   75   V: 15427884-15427958 Caenorhabditis elegans
Exon209721   104   V: 15431429-15431532 Caenorhabditis elegans
Exon209723   116   V: 15431580-15431695 Caenorhabditis elegans
Exon209725   117   V: 15431739-15431855 Caenorhabditis elegans
Exon209727   164   V: 15432004-15432167 Caenorhabditis elegans
Exon209729   67   V: 15432220-15432286 Caenorhabditis elegans
Exon209732   397   V: 15432330-15432726 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T26H5.8.1 15427145 15432726 -1

1 Sequence

Length
1547

1 Sequence Ontology Term

Identifier Name Description
transcript