WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T23F1.5.1 Sequence Name  T23F1.5.1
Length (nt)  3964   Chromosome Location  V: 15459411-15464502
Chromosome . Primary Identifier  V Chromosome Location . Start  15459411
Chromosome Location . End  15464502 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T23F1.5.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011948 rocf-1 T23F1.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T23F1.5 T23F1.5 3789   V: 15459504-15459619

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T23F1.5.1 15459411 15464502 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon209793   209   V: 15459411-15459619 Caenorhabditis elegans
Exon209794   169   V: 15459708-15459876 Caenorhabditis elegans
Exon209795   269   V: 15459921-15460189 Caenorhabditis elegans
Exon209796   161   V: 15460237-15460397 Caenorhabditis elegans
Exon209797   243   V: 15460447-15460689 Caenorhabditis elegans
Exon209798   106   V: 15460734-15460839 Caenorhabditis elegans
Exon209799   898   V: 15460884-15461781 Caenorhabditis elegans
Exon209800   312   V: 15461843-15462154 Caenorhabditis elegans
Exon209801   914   V: 15462205-15463118 Caenorhabditis elegans
Exon209802   454   V: 15463165-15463618 Caenorhabditis elegans
Exon209803   229   V: 15464274-15464502 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T23F1.5.1 15459411 15464502 -1

1 Sequence

Length
3964

1 Sequence Ontology Term

Identifier Name Description
transcript