WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T23F1.7b.1 Sequence Name  T23F1.7b.1
Length (nt)  2564   Chromosome Location  V: 15471329-15476124
Chromosome . Primary Identifier  V Chromosome Location . Start  15471329
Chromosome Location . End  15476124 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T23F1.7b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001054 dpf-1 T23F1.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T23F1.7b T23F1.7b 2400   V: 15471374-15471412

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T23F1.7b.1 15471329 15476124 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon209830   84   V: 15471329-15471412 Caenorhabditis elegans
Exon209833   115   V: 15472742-15472856 Caenorhabditis elegans
Exon209836   179   V: 15472957-15473135 Caenorhabditis elegans
Exon209840   258   V: 15473210-15473467 Caenorhabditis elegans
Exon209844   507   V: 15473752-15474258 Caenorhabditis elegans
Exon209847   472   V: 15474383-15474854 Caenorhabditis elegans
Exon209850   99   V: 15474901-15474999 Caenorhabditis elegans
Exon209853   274   V: 15475049-15475322 Caenorhabditis elegans
Exon209856   164   V: 15475448-15475611 Caenorhabditis elegans
Exon209859   120   V: 15475658-15475777 Caenorhabditis elegans
Exon209863   292   V: 15475833-15476124 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T23F1.7b.1 15471329 15476124 1

1 Sequence

Length
2564

1 Sequence Ontology Term

Identifier Name Description
transcript