WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T23F1.7a.1 Sequence Name  T23F1.7a.1
Length (nt)  2496   Chromosome Location  V: 15471335-15476122
Chromosome . Primary Identifier  V Chromosome Location . Start  15471335
Chromosome Location . End  15476122 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T23F1.7a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001054 dpf-1 T23F1.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T23F1.7a T23F1.7a 2340   V: 15471374-15471412

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T23F1.7a.1 15471335 15476122 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon209811   78   V: 15471335-15471412 Caenorhabditis elegans
Exon209812   115   V: 15472742-15472856 Caenorhabditis elegans
Exon209815   179   V: 15472957-15473135 Caenorhabditis elegans
Exon209818   119   V: 15473210-15473328 Caenorhabditis elegans
Exon209821   79   V: 15473389-15473467 Caenorhabditis elegans
Exon209823   507   V: 15473752-15474258 Caenorhabditis elegans
Exon209826   472   V: 15474383-15474854 Caenorhabditis elegans
Exon209829   99   V: 15474901-15474999 Caenorhabditis elegans
Exon209832   274   V: 15475049-15475322 Caenorhabditis elegans
Exon209835   164   V: 15475448-15475611 Caenorhabditis elegans
Exon209838   120   V: 15475658-15475777 Caenorhabditis elegans
Exon209842   290   V: 15475833-15476122 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T23F1.7a.1 15471335 15476122 1

1 Sequence

Length
2496

1 Sequence Ontology Term

Identifier Name Description
transcript