WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C06B8.2c.1 Sequence Name  C06B8.2c.1
Length (nt)  1487   Chromosome Location  V: 15476060-15478556
Chromosome . Primary Identifier  V Chromosome Location . Start  15476060
Chromosome Location . End  15478556 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C06B8.2c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007368 C06B8.2 C06B8.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C06B8.2c C06B8.2c 1302   V: 15476176-15476261

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C06B8.2c.1 15476060 15478556 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon209844   202   V: 15476060-15476261 Caenorhabditis elegans
Exon209850   112   V: 15476311-15476422 Caenorhabditis elegans
Exon209852   178   V: 15476466-15476643 Caenorhabditis elegans
Exon209859   124   V: 15476717-15476840 Caenorhabditis elegans
Exon209865   61   V: 15476884-15476944 Caenorhabditis elegans
Exon209871   126   V: 15477254-15477379 Caenorhabditis elegans
Exon209877   186   V: 15477424-15477609 Caenorhabditis elegans
Exon209883   119   V: 15477688-15477806 Caenorhabditis elegans
Exon209889   61   V: 15477918-15477978 Caenorhabditis elegans
Exon209895   165   V: 15478025-15478189 Caenorhabditis elegans
Exon209900   101   V: 15478256-15478356 Caenorhabditis elegans
Exon209903   52   V: 15478505-15478556 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C06B8.2c.1 15476060 15478556 -1

1 Sequence

Length
1487

1 Sequence Ontology Term

Identifier Name Description
transcript