WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C06B8.2b.3 Sequence Name  C06B8.2b.3
Length (nt)  1531   Chromosome Location  V: 15476060-15478360
Chromosome . Primary Identifier  V Chromosome Location . Start  15476060
Chromosome Location . End  15478360 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C06B8.2b.3

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007368 C06B8.2 C06B8.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C06B8.2b C06B8.2b 1131   V: 15476439-15476643

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C06B8.2b.3 15476060 15478360 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon209845   584   V: 15476060-15476643 Caenorhabditis elegans
Exon209858   124   V: 15476717-15476840 Caenorhabditis elegans
Exon209864   61   V: 15476884-15476944 Caenorhabditis elegans
Exon209870   126   V: 15477254-15477379 Caenorhabditis elegans
Exon209876   186   V: 15477424-15477609 Caenorhabditis elegans
Exon209882   119   V: 15477688-15477806 Caenorhabditis elegans
Exon209888   61   V: 15477918-15477978 Caenorhabditis elegans
Exon209894   165   V: 15478025-15478189 Caenorhabditis elegans
Exon209902   105   V: 15478256-15478360 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C06B8.2b.3 15476060 15478360 -1

1 Sequence

Length
1531

1 Sequence Ontology Term

Identifier Name Description
transcript