WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C06B8.2b.2 Sequence Name  C06B8.2b.2
Length (nt)  1593   Chromosome Location  V: 15476060-15478570
Chromosome . Primary Identifier  V Chromosome Location . Start  15476060
Chromosome Location . End  15478570 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C06B8.2b.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007368 C06B8.2 C06B8.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C06B8.2b C06B8.2b 1131   V: 15476439-15476643

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C06B8.2b.2 15476060 15478570 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon209866   584   V: 15476060-15476643 Caenorhabditis elegans
Exon209877   124   V: 15476717-15476840 Caenorhabditis elegans
Exon209883   61   V: 15476884-15476944 Caenorhabditis elegans
Exon209889   126   V: 15477254-15477379 Caenorhabditis elegans
Exon209895   186   V: 15477424-15477609 Caenorhabditis elegans
Exon209901   119   V: 15477688-15477806 Caenorhabditis elegans
Exon209907   61   V: 15477918-15477978 Caenorhabditis elegans
Exon209913   165   V: 15478025-15478189 Caenorhabditis elegans
Exon209919   101   V: 15478256-15478356 Caenorhabditis elegans
Exon209925   66   V: 15478505-15478570 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C06B8.2b.2 15476060 15478570 -1

1 Sequence

Length
1593

1 Sequence Ontology Term

Identifier Name Description
transcript