WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C06B8.2d.1 Sequence Name  C06B8.2d.1
Length (nt)  1546   Chromosome Location  V: 15476060-15478566
Chromosome . Primary Identifier  V Chromosome Location . Start  15476060
Chromosome Location . End  15478566 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C06B8.2d.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007368 C06B8.2 C06B8.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C06B8.2d C06B8.2d 1296   V: 15476231-15476422

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C06B8.2d.1 15476060 15478566 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon209846   363   V: 15476060-15476422 Caenorhabditis elegans
Exon209853   178   V: 15476466-15476643 Caenorhabditis elegans
Exon209860   124   V: 15476717-15476840 Caenorhabditis elegans
Exon209866   61   V: 15476884-15476944 Caenorhabditis elegans
Exon209872   126   V: 15477254-15477379 Caenorhabditis elegans
Exon209878   186   V: 15477424-15477609 Caenorhabditis elegans
Exon209884   119   V: 15477688-15477806 Caenorhabditis elegans
Exon209890   61   V: 15477918-15477978 Caenorhabditis elegans
Exon209896   165   V: 15478025-15478189 Caenorhabditis elegans
Exon209901   101   V: 15478256-15478356 Caenorhabditis elegans
Exon209904   62   V: 15478505-15478566 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C06B8.2d.1 15476060 15478566 -1

1 Sequence

Length
1546

1 Sequence Ontology Term

Identifier Name Description
transcript