WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C06B8.2a.1 Sequence Name  C06B8.2a.1
Length (nt)  1443   Chromosome Location  V: 15476061-15478749
Chromosome . Primary Identifier  V Chromosome Location . Start  15476061
Chromosome Location . End  15478749 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C06B8.2a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007368 C06B8.2 C06B8.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C06B8.2a C06B8.2a 1059   V: 15476231-15476261

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C06B8.2a.1 15476061 15478749 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon209869   201   V: 15476061-15476261 Caenorhabditis elegans
Exon209874   102   V: 15476542-15476643 Caenorhabditis elegans
Exon209875   124   V: 15476717-15476840 Caenorhabditis elegans
Exon209881   61   V: 15476884-15476944 Caenorhabditis elegans
Exon209887   126   V: 15477254-15477379 Caenorhabditis elegans
Exon209893   186   V: 15477424-15477609 Caenorhabditis elegans
Exon209899   119   V: 15477688-15477806 Caenorhabditis elegans
Exon209905   61   V: 15477918-15477978 Caenorhabditis elegans
Exon209911   165   V: 15478025-15478189 Caenorhabditis elegans
Exon209917   101   V: 15478256-15478356 Caenorhabditis elegans
Exon209926   135   V: 15478505-15478639 Caenorhabditis elegans
Exon209928   62   V: 15478688-15478749 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C06B8.2a.1 15476061 15478749 -1

1 Sequence

Length
1443

1 Sequence Ontology Term

Identifier Name Description
transcript