WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C06B8.2c.1 Sequence Name  C06B8.2c.1
Length (nt)  1487   Chromosome Location  V: 15476060-15478556
Chromosome . Primary Identifier  V Chromosome Location . Start  15476060
Chromosome Location . End  15478556 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C06B8.2c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007368 C06B8.2 C06B8.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C06B8.2c C06B8.2c 1302   V: 15476176-15476261

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C06B8.2c.1 15476060 15478556 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon209899   202   V: 15476060-15476261 Caenorhabditis elegans
Exon209904   112   V: 15476311-15476422 Caenorhabditis elegans
Exon209906   178   V: 15476466-15476643 Caenorhabditis elegans
Exon209913   124   V: 15476717-15476840 Caenorhabditis elegans
Exon209919   61   V: 15476884-15476944 Caenorhabditis elegans
Exon209925   126   V: 15477254-15477379 Caenorhabditis elegans
Exon209931   186   V: 15477424-15477609 Caenorhabditis elegans
Exon209937   119   V: 15477688-15477806 Caenorhabditis elegans
Exon209943   61   V: 15477918-15477978 Caenorhabditis elegans
Exon209949   165   V: 15478025-15478189 Caenorhabditis elegans
Exon209954   101   V: 15478256-15478356 Caenorhabditis elegans
Exon209957   52   V: 15478505-15478556 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C06B8.2c.1 15476060 15478556 -1

1 Sequence

Length
1487

1 Sequence Ontology Term

Identifier Name Description
transcript