WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00010733 Gene Name  C06B8.t1
Sequence Name  ? C06B8.t1 Organism  Caenorhabditis elegans
Biotype  SO:0001272 Genetic Position 
Length (nt)  ? 72
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
WBGene00010733

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:C06B8.t1 C06B8.t1 72   V: 15479985-15480056
 

Other

0 CDSs

4 RNAi Result

WormBase ID
WBRNAi00039856
WBRNAi00010281
WBRNAi00028557
WBRNAi00115844

10 Allele

Public Name
gk963271
gk963301
gk964458
gk964459
gk964389
WBVar02121281
WBVar02123129
gk510874
gk255876
gk255875

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
WBGene00010733 15479985 15480056 -1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

0 Downstream Intergenic Region

1 Expression Clusters

Regulated By Treatment Description Algorithm Primary Identifier
  Transcripts depleted in purified oocyte P bodies comparing to in the whole animal. DESeq2, FDR < 0.05, fold change > 2. WBPaper00065975:P-body_vs_WholeAnimal_depleted

0 Expression Patterns

0 GO Annotation

0 Homologues

1 Locations


Feature . Primary Identifier
Start End Strand
WBGene00010733 15479985 15480056 -1

0 Ontology Annotations

0 Regulates Expr Cluster

1 Sequence

Length
72

1 Sequence Ontology Term