WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

Gene :

WormBase Gene ID  ? WBGene00010777 Gene Name  C06B8.t2
Sequence Name  ? C06B8.t2 Organism  Caenorhabditis elegans
Automated Description  Is affected by Ethanol based on RNA-seq studies. Biotype  SO:0001272
Genetic Position  Length (nt)  ? 84
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
WBGene00010777

Genomics

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:C06B8.t2 C06B8.t2 73   V: 15480694-15480777
 

Other

0 CDSs

1 RNAi Result

WormBase ID
WBRNAi00028557

10 Allele

Public Name
gk963271
gk963301
gk964458
gk964459
gk964389
WBVar02121281
WBVar02123129
gk773756
gk368595
tm4358

1 Chromosome

WormBase ID Organism Length (nt)
V Caenorhabditis elegans 20924180  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
WBGene00010777 15480694 15480777 1

2 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  

0 Downstream Intergenic Region

1 Expression Clusters

Regulated By Treatment Description Algorithm Primary Identifier
  Genes that are upregulated by 0.2M ethanol treatment. Differences in gene expression levels between the two groups of worms were analyzed with Cufflinks 1.0.3, using a cutoff of twofold difference and FDR corrected p < 0.05. WBPaper00041954:ethanol_upregulated

0 Expression Patterns

0 GO Annotation

0 Homologues

1 Locations


Feature . Primary Identifier
Start End Strand
WBGene00010777 15480694 15480777 1

0 Ontology Annotations

0 Regulates Expr Cluster

1 Sequence

Length
84

1 Sequence Ontology Term